diff --git a/Makefile.am b/Makefile.am
deleted file mode 100644
index d3ef224d..00000000
--- a/Makefile.am
+++ /dev/null
@@ -1,42 +0,0 @@
-SUBDIRS = src perl scripts corepkgs doc misc tests
-EXTRA_DIST = substitute.mk nix.spec nix.spec.in bootstrap.sh \
-  NEWS version misc/systemd/nix-daemon.service
-
-pkginclude_HEADERS = config.h
-
-include ./substitute.mk
-
-nix.spec: nix.spec.in
-
-install-data-local: init-state
-	$(INSTALL) -d $(DESTDIR)$(sysconfdir)/nix
-	$(INSTALL) -d $(DESTDIR)$(docdir)
-	$(INSTALL_DATA) README $(DESTDIR)$(docdir)/
-
-if INIT_STATE
-
-# For setuid operation, you can enable the following:
-# INIT_FLAGS = -g @NIX_GROUP@ -o @NIX_USER@
-# GROUP_WRITABLE = -m 775
-
-init-state:
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix/db
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/log/nix
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/log/nix/drvs
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix/profiles
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix/gcroots
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix/temproots
-	$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(localstatedir)/nix/userpool
-	-$(INSTALL) $(INIT_FLAGS) -d $(DESTDIR)$(storedir)
-	$(INSTALL) $(INIT_FLAGS) $(GROUP_WRITABLE) -d $(DESTDIR)$(localstatedir)/nix/manifests
-
-else
-
-init-state:
-
-endif
-
-NEWS:
-	$(MAKE) -C doc/manual NEWS.txt
-	cp $(srcdir)/doc/manual/NEWS.txt NEWS
diff --git a/corepkgs/Makefile.am b/corepkgs/Makefile.am
deleted file mode 100644
index 111b667d..00000000
--- a/corepkgs/Makefile.am
+++ /dev/null
@@ -1,12 +0,0 @@
-all-local: config.nix
-
-files = nar.nix buildenv.nix buildenv.pl unpack-channel.nix derivation.nix fetchurl.nix \
-	imported-drv-to-derivation.nix
-
-install-exec-local:
-	$(INSTALL) -d $(DESTDIR)$(datadir)/nix/corepkgs
-	$(INSTALL_DATA) config.nix $(files) $(DESTDIR)$(datadir)/nix/corepkgs
-
-include ../substitute.mk
-
-EXTRA_DIST = config.nix.in $(files)
diff --git a/doc/Makefile.am b/doc/Makefile.am
deleted file mode 100644
index e76efafd..00000000
--- a/doc/Makefile.am
+++ /dev/null
@@ -1 +0,0 @@
-SUBDIRS = manual
diff --git a/doc/manual/Makefile.am b/doc/manual/Makefile.am
deleted file mode 100644
index 56be7e1b..00000000
--- a/doc/manual/Makefile.am
+++ /dev/null
@@ -1,117 +0,0 @@
-XMLLINT = $(xmllint) --nonet $(xmlflags)
-XSLTPROC = $(xsltproc) --nonet $(xmlflags) \
- --param section.autolabel 1 \
- --param section.label.includes.component.label 1 \
- --param html.stylesheet \'style.css\' \
- --param xref.with.number.and.title 1 \
- --param toc.section.depth 3 \
- --param admon.style \'\' \
- --param callout.graphics.extension \'.gif\' \
- --param contrib.inline.enabled 0
-
-dblatex_opts = \
- -P doc.collab.show=0 \
- -P latex.output.revhistory=0
-
-# Note: we use GIF for now, since the PNGs shipped with Docbook aren't
-# transparent.
-
-man1_MANS = nix-env.1 nix-build.1 nix-shell.1 nix-store.1 nix-instantiate.1 \
- nix-collect-garbage.1 nix-push.1 nix-pull.1 \
- nix-prefetch-url.1 nix-channel.1 \
- nix-install-package.1 nix-hash.1 nix-copy-closure.1
-
-man5_MANS = nix.conf.5
-
-man8_MANS = nix-daemon.8
-
-FIGURES = figures/user-environments.png
-
-MANUAL_SRCS = manual.xml introduction.xml installation.xml \
- package-management.xml writing-nix-expressions.xml builtins.xml \
- build-farm.xml \
- $(man1_MANS:.1=.xml) $(man8_MANS:.8=.xml) \
- troubleshooting.xml bugs.xml opt-common.xml opt-common-syn.xml opt-inst-syn.xml \
- env-common.xml quick-start.xml nix-lang-ref.xml glossary.xml \
- conf-file.xml release-notes.xml \
- style.css images
-
-# Do XInclude processing.
-manual.xmli: $(MANUAL_SRCS) version.txt
-	$(XMLLINT) --xinclude $< -o $@.tmp
-	mv $@.tmp $@
-
-# Note: RelaxNG validation requires xmllint >= 2.7.4.
-manual.is-valid: manual.xmli
-	$(XSLTPROC) --novalid --stringparam profile.condition manual \
-	  $(docbookxsl)/profiling/profile.xsl $< 2> /dev/null | \
-	  $(XMLLINT) --noout --relaxng $(docbookrng)/docbook.rng -
-	touch $@
-
-version.txt:
-	echo -n $(VERSION) > version.txt
-
-man $(MANS): manual.is-valid
-	$(XSLTPROC) --stringparam profile.condition manpage \
-	  $(docbookxsl)/profiling/profile.xsl manual.xmli 2> /dev/null | \
-	  $(XSLTPROC) $(docbookxsl)/manpages/docbook.xsl -
-
-manual.html: $(MANUAL_SRCS) manual.is-valid images
-	$(XSLTPROC) --xinclude --stringparam profile.condition manual \
-	  $(docbookxsl)/profiling/profile.xsl manual.xml | \
-	  $(XSLTPROC) --output manual.html $(docbookxsl)/html/docbook.xsl -
-
-manual.pdf: $(MANUAL_SRCS) manual.is-valid images
-	if test "$(dblatex)" != ""; then \
-		$(XSLTPROC) --xinclude --stringparam profile.condition manual \
-		  $(docbookxsl)/profiling/profile.xsl manual.xml | \
-		  $(dblatex) -o manual.pdf $(dblatex_opts) -; \
-	else \
-		echo "Please install dblatex and rerun configure."; \
-		exit 1; \
-	fi
-
-
-NEWS_OPTS = \
- --stringparam generate.toc "article nop" \
- --stringparam section.autolabel.max.depth 0 \
- --stringparam header.rule 0
-
-NEWS.html: release-notes.xml
-	$(XSLTPROC) --xinclude --output $@ $(NEWS_OPTS) \
-	  $(docbookxsl)/html/docbook.xsl release-notes.xml
-
-NEWS.txt: release-notes.xml
-	$(XSLTPROC) --xinclude quote-literals.xsl release-notes.xml | \
-	  $(XSLTPROC) --output $@.tmp.html $(NEWS_OPTS) \
-	  $(docbookxsl)/html/docbook.xsl -
-	LANG=en_US $(w3m) -dump $@.tmp.html > $@
-	rm $@.tmp.html
-
-
-all-local: manual.html NEWS.html NEWS.txt
-
-install-data-local: manual.html
-	$(INSTALL) -d $(DESTDIR)$(docdir)/manual
-	$(INSTALL_DATA) manual.html $(DESTDIR)$(docdir)/manual
-	ln -sf manual.html $(DESTDIR)$(docdir)/manual/index.html
-	$(INSTALL_DATA) style.css $(DESTDIR)$(docdir)/manual
-	cp -r images $(DESTDIR)$(docdir)/manual/images
-	$(INSTALL) -d $(DESTDIR)$(docdir)/manual/figures
-	$(INSTALL_DATA) $(FIGURES) $(DESTDIR)$(docdir)/manual/figures
-	$(INSTALL) -d $(DESTDIR)$(docdir)/release-notes
-	$(INSTALL_DATA) NEWS.html $(DESTDIR)$(docdir)/release-notes/index.html
-	$(INSTALL_DATA) style.css $(DESTDIR)$(docdir)/release-notes/
-
-images:
-	mkdir images
-#	cp $(docbookxsl)/images/*.gif images
-	mkdir images/callouts
-	cp $(docbookxsl)/images/callouts/*.gif images/callouts
-	chmod -R +w images
-
-KEEP = manual.html manual.xmli manual.is-valid version.txt $(MANS) NEWS.html NEWS.txt
-
-EXTRA_DIST = $(MANUAL_SRCS) $(FIGURES) $(KEEP)
-
-DISTCLEANFILES = $(KEEP)
diff --git a/misc/Makefile.am b/misc/Makefile.am
deleted file mode 100644
index ef10d1e9..00000000
--- a/misc/Makefile.am
+++ /dev/null
@@ -1 +0,0 @@
-SUBDIRS = emacs
diff --git a/misc/emacs/Makefile.am b/misc/emacs/Makefile.am
deleted file mode 100644
index 49f19fe5..00000000
--- a/misc/emacs/Makefile.am
+++ /dev/null
@@ -1,5 +0,0 @@
-EXTRA_DIST = nix-mode.el
-
-install-data-local:
-	$(INSTALL) -d $(DESTDIR)$(datadir)/emacs/site-lisp
-	$(INSTALL_DATA) $(srcdir)/nix-mode.el $(DESTDIR)$(datadir)/emacs/site-lisp
diff --git a/perl/Makefile.am b/perl/Makefile.am
deleted file mode 100644
index b8e60bc2..00000000
--- a/perl/Makefile.am
+++ /dev/null
@@ -1,38 +0,0 @@
-PERL_MODULES = lib/Nix/Store.pm lib/Nix/Manifest.pm lib/Nix/GeneratePatches.pm lib/Nix/SSH.pm lib/Nix/CopyClosure.pm lib/Nix/Config.pm.in lib/Nix/Utils.pm lib/Nix/Crypto.pm
-
-all: $(PERL_MODULES:.in=)
-
-install-exec-local: $(PERL_MODULES:.in=) install-perl-xs
-	$(INSTALL) -d $(DESTDIR)$(perllibdir)/Nix
-	$(INSTALL_DATA) $(PERL_MODULES:.in=) $(DESTDIR)$(perllibdir)/Nix
-
-if PERL_BINDINGS
-install-perl-xs:
-	$(INSTALL) -d $(DESTDIR)$(perllibdir)/auto/Nix/Store
-	ln -sfn $(pkglibdir)/libNixStore$(dynlib_suffix) $(DESTDIR)$(perllibdir)/auto/Nix/Store/Store$(dynlib_suffix)
-
-# Awful hackery to get libtool to build Perl XS bindings.
-pkglib_LTLIBRARIES = libNixStore.la
-
-nodist_libNixStore_la_SOURCES = lib/Nix/Store.cc
-
-CLEANFILES = lib/Nix/Store.cc
-
-libNixStore_la_LIBADD = $(top_builddir)/src/libstore/libstore.la
-
-AM_CXXFLAGS = \
-  -I$(top_srcdir)/src -I$(top_srcdir)/src/libutil -I$(top_srcdir)/src/libstore \
-  -I$(shell $(perl) -e 'use Config; print $$Config{archlibexp};')/CORE \
-  -D_FILE_OFFSET_BITS=64
-
-lib/Nix/Store.cc: lib/Nix/Store.xs
-	$(INSTALL) -d lib/Nix
-	xsubpp $^ -output $@
-
-else
-install-perl-xs:
-endif
-
-EXTRA_DIST = $(PERL_MODULES) lib/Nix/Store.xs
-
-include ../substitute.mk
diff --git a/scripts/Makefile.am b/scripts/Makefile.am
deleted file mode 100644
index d9f39aad..00000000
--- a/scripts/Makefile.am
+++ /dev/null
@@ -1,41 +0,0 @@
-bin_SCRIPTS = nix-collect-garbage \
-  nix-pull nix-push nix-prefetch-url \
-  nix-install-package nix-channel nix-build \
-  nix-copy-closure nix-generate-patches
-
-noinst_SCRIPTS = nix-profile.sh \
-  find-runtime-roots.pl build-remote.pl nix-reduce-build \
-  copy-from-other-stores.pl nix-http-export.cgi
-
-profiledir = $(sysconfdir)/profile.d
-
-install-exec-local: download-using-manifests.pl copy-from-other-stores.pl download-from-binary-cache.pl find-runtime-roots.pl
-	$(INSTALL) -d $(DESTDIR)$(profiledir)
-	$(INSTALL_DATA) nix-profile.sh $(DESTDIR)$(profiledir)/nix.sh
-	$(INSTALL) -d $(DESTDIR)$(libexecdir)/nix
-	$(INSTALL_PROGRAM) find-runtime-roots.pl $(DESTDIR)$(libexecdir)/nix 
-	$(INSTALL_PROGRAM) build-remote.pl $(DESTDIR)$(libexecdir)/nix 
-	$(INSTALL) -d $(DESTDIR)$(libexecdir)/nix/substituters
-	$(INSTALL_PROGRAM) download-using-manifests.pl copy-from-other-stores.pl download-from-binary-cache.pl $(DESTDIR)$(libexecdir)/nix/substituters
-	$(INSTALL) -d $(DESTDIR)$(sysconfdir)/nix
-	ln -sf nix-build $(DESTDIR)$(bindir)/nix-shell
-
-include ../substitute.mk
-
-EXTRA_DIST = nix-collect-garbage.in \
-  nix-pull.in nix-push.in nix-profile.sh.in \
-  nix-prefetch-url.in nix-install-package.in \
-  nix-channel.in \
-  nix-build.in \
-  download-using-manifests.pl.in \
-  copy-from-other-stores.pl.in \
-  download-from-binary-cache.pl.in \
-  nix-copy-closure.in \
-  find-runtime-roots.pl.in \
-  build-remote.pl.in \
-  nix-reduce-build.in \
-  nix-http-export.cgi.in \
-  nix-generate-patches.in
-
-clean:
-	rm -f $(bin_SCRIPTS) $(noinst_SCRIPTS)
diff --git a/src/Makefile.am b/src/Makefile.am
deleted file mode 100644
index a5e411b9..00000000
--- a/src/Makefile.am
+++ /dev/null
@@ -1,3 +0,0 @@
-SUBDIRS = boost libutil libstore libmain nix-store nix-hash \
- libexpr nix-instantiate nix-env nix-daemon \
- nix-log2xml bsdiff-4.3
diff --git a/src/boost/format/Makefile.am b/src/boost/format/Makefile.am
deleted file mode 100644
index 13e23d31..00000000
--- a/src/boost/format/Makefile.am
+++ /dev/null
@@ -1,12 +0,0 @@
-pkglib_LTLIBRARIES = libformat.la
-
-libformat_la_SOURCES = format_implementation.cc free_funcs.cc \
- parsing.cc 
-
-pkginclude_HEADERS = exceptions.hpp feed_args.hpp format_class.hpp \
- format_fwd.hpp group.hpp internals.hpp internals_fwd.hpp \
- macros_default.hpp
-
-pkgincludedir = ${includedir}/nix/boost/format
-
-AM_CXXFLAGS = -Wall -I$(srcdir)/../..
diff --git a/src/bsdiff-4.3/Makefile.am b/src/bsdiff-4.3/Makefile.am
deleted file mode 100644
index 62315333..00000000
--- a/src/bsdiff-4.3/Makefile.am
+++ /dev/null
@@ -1,13 +0,0 @@
-EXTRA_DIST = compat-include
-
-libexec_PROGRAMS = bsdiff bspatch
-
-bsdiff_SOURCES = bsdiff.c
-
-bsdiff_LDADD = -lbz2
-
-bspatch_SOURCES = bspatch.c
-
-bspatch_LDADD = -lbz2
-
-AM_CFLAGS = -O3 ${bsddiff_compat_include}
diff --git a/src/libexpr/Makefile.am b/src/libexpr/Makefile.am
deleted file mode 100644
index 7edbe771..00000000
--- a/src/libexpr/Makefile.am
+++ /dev/null
@@ -1,40 +0,0 @@
-pkglib_LTLIBRARIES = libexpr.la
-
-libexpr_la_SOURCES = \
- nixexpr.cc eval.cc primops.cc lexer-tab.cc parser-tab.cc \
- get-drvs.cc attr-path.cc value-to-xml.cc value-to-json.cc \
- common-opts.cc names.cc
-
-pkginclude_HEADERS = \
- nixexpr.hh eval.hh eval-inline.hh lexer-tab.hh parser-tab.hh \
- get-drvs.hh attr-path.hh value-to-xml.hh value-to-json.hh \
- common-opts.hh names.hh symbol-table.hh value.hh
-
-libexpr_la_LIBADD = ../libutil/libutil.la ../libstore/libstore.la \
- ../boost/format/libformat.la @BDW_GC_LIBS@
-
-BUILT_SOURCES = \
- parser-tab.hh lexer-tab.hh parser-tab.cc lexer-tab.cc
-
-EXTRA_DIST = lexer.l parser.y
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. \
- -I$(srcdir)/../libutil -I$(srcdir)/../libstore
-
-
-# Parser generation.
-
-parser-tab.cc parser-tab.hh: parser.y
-	$(bison) -v -o parser-tab.cc $(srcdir)/parser.y -d
-
-lexer-tab.cc lexer-tab.hh: lexer.l
-	$(flex) --outfile lexer-tab.cc --header-file=lexer-tab.hh $(srcdir)/lexer.l 
-
-
-# SDF stuff (not built by default).
-nix.tbl: nix.sdf
-	sdf2table -m Nix -s -i nix.sdf -o nix.tbl
-
-test.ast: test.nix nix.tbl
-	sglri -p nix.tbl -i test.nix -o test.ast
diff --git a/src/libmain/Makefile.am b/src/libmain/Makefile.am
deleted file mode 100644
index 75b9d83d..00000000
--- a/src/libmain/Makefile.am
+++ /dev/null
@@ -1,11 +0,0 @@
-pkglib_LTLIBRARIES = libmain.la
-
-libmain_la_SOURCES = shared.cc stack.cc
-
-libmain_la_LIBADD = ../libstore/libstore.la @BDW_GC_LIBS@
-
-pkginclude_HEADERS = shared.hh
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. -I$(srcdir)/../libutil \
- -I$(srcdir)/../libstore
diff --git a/src/libstore/Makefile.am b/src/libstore/Makefile.am
deleted file mode 100644
index 3dfb1e0c..00000000
--- a/src/libstore/Makefile.am
+++ /dev/null
@@ -1,33 +0,0 @@
-pkglib_LTLIBRARIES = libstore.la
-
-libstore_la_SOURCES = \
-  store-api.cc local-store.cc remote-store.cc derivations.cc build.cc misc.cc \
-  globals.cc references.cc pathlocks.cc gc.cc \
-  optimise-store.cc
-
-pkginclude_HEADERS = \
-  store-api.hh local-store.hh remote-store.hh derivations.hh misc.hh \
-  globals.hh references.hh pathlocks.hh \
-  worker-protocol.hh
-
-libstore_la_LIBADD = ../libutil/libutil.la ../boost/format/libformat.la @SQLITE3_LIBS@ -lbz2
-
-EXTRA_DIST = schema.sql
-
-AM_CXXFLAGS = -Wall \
- -I$(srcdir)/.. -I$(srcdir)/../libutil \
- -DNIX_STORE_DIR=\"$(storedir)\" \
- -DNIX_DATA_DIR=\"$(datadir)\" \
- -DNIX_STATE_DIR=\"$(localstatedir)/nix\" \
- -DNIX_LOG_DIR=\"$(localstatedir)/log/nix\" \
- -DNIX_CONF_DIR=\"$(sysconfdir)/nix\" \
- -DNIX_LIBEXEC_DIR=\"$(libexecdir)\" \
- -DNIX_BIN_DIR=\"$(bindir)\" \
- -DNIX_VERSION=\"$(VERSION)\" \
- -I$(srcdir)/.. -I$(srcdir)/../libutil \
- -I$(srcdir)/../libstore
-
-local-store.lo: schema.sql.hh
-
-%.sql.hh: %.sql
-	sed -e 's/"/\\"/g' -e 's/\(.*\)/"\1\\n"/' < $< > $@ || (rm $@ && exit 1)
diff --git a/src/libutil/Makefile.am b/src/libutil/Makefile.am
deleted file mode 100644
index 0c4073e6..00000000
--- a/src/libutil/Makefile.am
+++ /dev/null
@@ -1,18 +0,0 @@
-pkglib_LTLIBRARIES = libutil.la
-
-libutil_la_SOURCES = util.cc hash.cc serialise.cc \
-  archive.cc xml-writer.cc affinity.cc
-
-libutil_la_LIBADD = ../boost/format/libformat.la
-
-pkginclude_HEADERS = util.hh hash.hh serialise.hh \
-  archive.hh xml-writer.hh types.hh affinity.hh
-
-if !HAVE_OPENSSL
-libutil_la_SOURCES += \
- md5.c md5.h sha1.c sha1.h sha256.c sha256.h md32_common.h
-else
-libutil_la_LIBADD += @OPENSSL_LIBS@
-endif
-
-AM_CXXFLAGS = -Wall -I$(srcdir)/..
diff --git a/src/nix-daemon/Makefile.am b/src/nix-daemon/Makefile.am
deleted file mode 100644
index b8e9f4a0..00000000
--- a/src/nix-daemon/Makefile.am
+++ /dev/null
@@ -1,12 +0,0 @@
-bin_PROGRAMS = nix-daemon
-
-nix_daemon_SOURCES = nix-daemon.cc
-nix_daemon_LDADD = ../libmain/libmain.la ../libstore/libstore.la ../libutil/libutil.la \
- ../boost/format/libformat.la
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. -I$(srcdir)/../libutil \
- -I$(srcdir)/../libstore -I$(srcdir)/../libmain
-
-install-exec-local:
-	ln -sf nix-daemon $(DESTDIR)$(bindir)/nix-worker
diff --git a/src/nix-env/Makefile.am b/src/nix-env/Makefile.am
deleted file mode 100644
index 4d3bd111..00000000
--- a/src/nix-env/Makefile.am
+++ /dev/null
@@ -1,12 +0,0 @@
-bin_PROGRAMS = nix-env
-
-nix_env_SOURCES = nix-env.cc profiles.cc profiles.hh user-env.cc user-env.hh
-
-nix_env_LDADD = ../libmain/libmain.la ../libexpr/libexpr.la \
- ../libstore/libstore.la ../libutil/libutil.la \
- ../boost/format/libformat.la
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. \
- -I$(srcdir)/../libutil -I$(srcdir)/../libstore \
- -I$(srcdir)/../libexpr -I$(srcdir)/../libmain -I../libexpr
diff --git a/src/nix-hash/Makefile.am b/src/nix-hash/Makefile.am
deleted file mode 100644
index ef7bb842..00000000
--- a/src/nix-hash/Makefile.am
+++ /dev/null
@@ -1,8 +0,0 @@
-bin_PROGRAMS = nix-hash
-
-nix_hash_SOURCES = nix-hash.cc
-nix_hash_LDADD = ../libmain/libmain.la ../libstore/libstore.la ../libutil/libutil.la \
- ../boost/format/libformat.la
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. -I$(srcdir)/../libutil -I$(srcdir)/../libstore -I$(srcdir)/../libmain
diff --git a/src/nix-instantiate/Makefile.am b/src/nix-instantiate/Makefile.am
deleted file mode 100644
index 96978f36..00000000
--- a/src/nix-instantiate/Makefile.am
+++ /dev/null
@@ -1,10 +0,0 @@
-bin_PROGRAMS = nix-instantiate
-
-nix_instantiate_SOURCES = nix-instantiate.cc
-nix_instantiate_LDADD = ../libmain/libmain.la ../libexpr/libexpr.la \
- ../libstore/libstore.la ../libutil/libutil.la \
- ../boost/format/libformat.la
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. -I$(srcdir)/../libutil -I$(srcdir)/../libstore \
- -I$(srcdir)/../libexpr -I$(srcdir)/../libmain -I../libexpr
diff --git a/src/nix-log2xml/Makefile.am b/src/nix-log2xml/Makefile.am
deleted file mode 100644
index c538fda0..00000000
--- a/src/nix-log2xml/Makefile.am
+++ /dev/null
@@ -1,17 +0,0 @@
-bin_PROGRAMS = nix-log2xml
-
-nix_log2xml_SOURCES = log2xml.cc
-
-%.xml: %.log nix-log2xml
-	./nix-log2xml < $< > $@
-
-%.html: %.xml mark-errors.xsl log2html.xsl
-	$(xsltproc) mark-errors.xsl $< | $(xsltproc) log2html.xsl - > $@
-
-LOG2HTML = $(srcdir)/mark-errors.xsl $(srcdir)/log2html.xsl $(srcdir)/treebits.js
-
-EXTRA_DIST = $(LOG2HTML)
-
-install-data-local:
-	$(INSTALL) -d $(DESTDIR)$(datadir)/nix/log2html
-	$(INSTALL_DATA) $(LOG2HTML) $(DESTDIR)$(datadir)/nix/log2html
diff --git a/src/nix-store/Makefile.am b/src/nix-store/Makefile.am
deleted file mode 100644
index fca9eff7..00000000
--- a/src/nix-store/Makefile.am
+++ /dev/null
@@ -1,12 +0,0 @@
-bin_PROGRAMS = nix-store
-
-nix_store_SOURCES =			\
-  nix-store.cc dotgraph.cc dotgraph.hh	\
-  xmlgraph.cc xmlgraph.hh
-
-nix_store_LDADD = ../libmain/libmain.la ../libstore/libstore.la ../libutil/libutil.la \
- ../boost/format/libformat.la -lbz2
-
-AM_CXXFLAGS = \
- -I$(srcdir)/.. -I$(srcdir)/../libutil \
- -I$(srcdir)/../libstore -I$(srcdir)/../libmain
diff --git a/tests/Makefile.am b/tests/Makefile.am
deleted file mode 100644
index 38cf7b1b..00000000
--- a/tests/Makefile.am
+++ /dev/null
@@ -1,52 +0,0 @@
-TESTS_ENVIRONMENT = NIX_REMOTE= $(bash) -e
-
-extra1 = $(shell pwd)/test-tmp/shared
-
-TESTS = init.sh hash.sh lang.sh add.sh simple.sh dependencies.sh \
-  parallel.sh build-hook.sh substitutes.sh substitutes2.sh \
-  fallback.sh nix-push.sh gc.sh gc-concurrent.sh verify.sh nix-pull.sh \
-  referrers.sh user-envs.sh logging.sh nix-build.sh misc.sh fixed.sh \
-  gc-runtime.sh install-package.sh check-refs.sh filter-source.sh \
-  remote-store.sh export.sh export-graph.sh negative-caching.sh \
-  binary-patching.sh timeout.sh secure-drv-outputs.sh nix-channel.sh \
-  multiple-outputs.sh import-derivation.sh fetchurl.sh optimise-store.sh \
-  binary-cache.sh nix-profile.sh
-
-XFAIL_TESTS =
-
-profiledir = $(sysconfdir)/profile.d
-
-include ../substitute.mk
-
-$(TESTS): common.sh config.nix
-
-EXTRA_DIST = $(TESTS) \
-  config.nix.in \
-  simple.nix simple.builder.sh \
-  hash-check.nix \
-  dependencies.nix dependencies.builder*.sh \
-  parallel.nix parallel.builder.sh \
-  build-hook.nix build-hook.hook.sh \
-  substituter.sh substituter2.sh \
-  gc-concurrent.nix gc-concurrent.builder.sh gc-concurrent2.builder.sh \
-  user-envs.nix user-envs.builder.sh \
-  fixed.nix fixed.builder1.sh fixed.builder2.sh \
-  gc-runtime.nix \
-  check-refs.nix \
-  filter-source.nix \
-  export-graph.nix \
-  negative-caching.nix \
-  binary-patching.nix \
-  timeout.nix timeout.builder.sh \
-  secure-drv-outputs.nix \
-  multiple-outputs.nix \
-  import-derivation.nix \
-  fetchurl.nix \
-  $(wildcard lang/*.nix) $(wildcard lang/*.exp) $(wildcard lang/*.exp.xml) $(wildcard lang/*.flags) $(wildcard lang/dir*/*.nix) \
-  common.sh.in
-
-# Hacky.
-check-am:
-	@echo "Warning: Nix has no 'make check'. Please install Nix and run 'make installcheck' instead."
-
-installcheck: check-TESTS